BIOSYSTEMS ENGINEERING RESEARCH GROUP 

 
ELİF ÖZKIRIMLI-Publications

 

1.  Utku Deniz, Kutlu O. Ulgen, and Elif Ozkirimli, 2015, " Identification of Tpx inhibitors against pathogen-host interactions", Computational Biology and Chemistry, 58 (2015) 126–138.

2.  Gursoy Yılmaz O., Ozkirimli Olmez E., Ulgen K.O., 2013, "Targeting the Akt1 allosteric site to identify novel scaffolds through virtual screening", Computational Biology and Chemistry, http://dx.doi.org/10.1016/j.compbiolchem.2013.10.005.

2.  Ozbuyukkaya G., Ozkirimli Olmez E., Ozergin Ulgen K., 2013, "Aminopurine derivatives as putative SopE inhibitors", Journal of Enzyme Inhibition and Medical Chemistry, DOI: http://dx.doi.org/10.3109/14756366.2012.759217.

3. Huang H, Ozkirimli E., Post CB (2009) “Comparison of Three Perturbation Molecular Dynamics Methods for Modeling Conformational Transitions”, Journal of Chemical Theory and Computation, 5-5, p. 1304-1314   

4.  Ozkirimli E., Yadav SS, Miller WT, Post CB. (2008) “An electrostatic network and long-range regulation of Src kinases”, Protein Science, 17-11, p. 1871-1880

5. Oh H, Ozkirimli E, Shah K, Harrison ML, Geahlen RL (2007) “Generation of an analog-sensitive syk tyrosine kinase for the study of signaling dynamics from the B cell antigen receptor”, Journal of Biological Chemistry, 282-46, p. 33760-33768

6. Ozkirimli, Elif and Carol B. Post (2006)  “Src kinase activation: A switched electrostatic network”.  Protein Science, 15, p. 1051-1062